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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21101324_21101930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21101324 - 21101930

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCGC

5'SS Class:

major

3'SS Sequence:

CTTCTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATCAAT

U12 Branch Point Sequence:

CAGGCATCAATC

Flanking Amino Acid:

FAQSLRLRCFRVVLGGSDQN

Intron Amino Acid Position:

925

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

54.8

39.4

Major BPS

56.8

0.17

1.3

66.4

36.8

Major PPT

85.4

0.8

0.7

Minor 5ss

24.3

-3

3.3

32.3

42.6

Minor BPS

44.5

-0.4

1.8

48.66

41.5

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930