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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2115239_2115810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2115239 - 2115810

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTATCTTATTT

Flanking Amino Acid:

AVDESELEAQAVTTSKWELF

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

25.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.79

0.7

77.9

36.6

Minor 5ss

42.5

-0.8

2.8

45.4

Minor BPS

62.6

0.47

1.6

78.62

37.9

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236