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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2116426_2117866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2116426 - 2117866

Intron Length:

1441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TATTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TATTCTTGAAAG

Flanking Amino Acid:

VNIMEDKETEEVPDDLDGAP

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

84.6

0.78

0.8

81.5

35.8

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

61.5

0.22

1.6

67.08

40.1

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002428

2102816 - 2147051

44236

ENSAPLT00000034347

2102816 - 2147051

44236