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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21189848_21197149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21189848 - 21197149

Intron Length:

7302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTGTGCTAATT

Flanking Amino Acid:

NPPGMDDQLWLVMEFCGAGS

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

81.9

0.72

0.9

79.9

32.1

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

-0.2

2.3

70.09

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032290

21120172 - 21201153

80982