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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2119074_2120116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2119074 - 2120116

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TGTTTAATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATATGTTTAATT

Flanking Amino Acid:

KVANASYYRKFFETKLCQIF

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

76.1

0.59

0.9

67.8

42.5

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

64.5

0.53

1.7

78.82

37.8

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236