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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2120197_2120734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2120197 - 2120734

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGAAGA

5'SS Class:

major

3'SS Sequence:

TTCTTGTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TCTAATTTATAC

Flanking Amino Acid:

SILKTPLPKKIARLYLVSDV

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

38.9

Major BPS

85.7

0.89

0.8

22.2

Major PPT

84.4

0.77

0.8

80.5

31.5

Minor 5ss

26.3

-2.7

2.9

31.7

42.2

Minor BPS

46.2

-0.3

1.8

57.14

41.3

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236