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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2123173_2124168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2123173 - 2124168

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTTATT

5'SS Class:

major

3'SS Sequence:

TTCTCTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CTTATAATACAT

Flanking Amino Acid:

MNREINNPMFRFLFENQTPA

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

34.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

73.6

0.53

0.9

37.4

Minor 5ss

35.2

-1.7

3.1

51.3

45.2

Minor BPS

40.2

-0.6

59.71

43.2

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236