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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21235112_21236418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21235112 - 21236418

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCACCC

Flanking Amino Acid:

AGSSERNRVRGNVKPEGSPV

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.1

0.63

0.9

71.9

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

47.3

-0.2

2.2

69.2

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011003

21227519 - 21258980

31462