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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21236517_21241532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21236517 - 21241532

Intron Length:

5016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

CCATCCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATCGAT

U12 Branch Point Sequence:

TTGCCCCCATCC

Flanking Amino Acid:

RDVTRPSRPADLTALAKELR

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

53.6

0.09

1.3

53.8

41.9

Major PPT

69.8

0.45

0.8

66.5

29.6

Minor 5ss

37.6

-1.4

3.2

60.2

44.1

Minor BPS

45.4

-0.3

2.1

61.23

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011003

21227519 - 21258980

31462