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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21251888_21252389_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21251888 - 21252389

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCTC

5'SS Class:

weak_major

3'SS Sequence:

CTTTTGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTTTTGCCAACA

Flanking Amino Acid:

EGLNVLVTISGKKNKLRVYY

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.3

58.2

46.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.56

0.9

70.1

35.3

Minor 5ss

46.9

-0.3

3.1

68.3

42.6

Minor BPS

44.3

-0.4

2.4

63.62

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011003

21227519 - 21258980

31462