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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21253165_21254747_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21253165 - 21254747

Intron Length:

1583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTTT

5'SS Class:

strong_major

3'SS Sequence:

AGGATTATAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TTTTCCGTGATA

Flanking Amino Acid:

KPYHKFMAFKSFADLQHKPL

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

88.1

28.7

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

-0

1.2

46.7

43.4

Minor 5ss

45.1

-0.5

3.1

44.3

Minor BPS

66.6

0.52

82.09

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011003

21227519 - 21258980

31462