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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21264025_21264548_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21264025 - 21264548

Intron Length:
524

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACCACA

5'SS Class:
major

3'SS Sequence:
GCTCCCTCGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTGAG

U12 Branch Point Sequence:
AGGGGCTGAGGC

Flanking Amino Acid:
EKKSKMQAEKHLTGTLVLSV

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.7
0.63
1.2
71.6
40.2

Major BPS
43.9
-0.3
1.6
36.8
44.4

Major PPT
66.4
0.37
1
61.5
34.9

Minor 5ss
45.2
-0.5
2.6
58.9
45.3

Minor BPS
35.2
-1.1
2.1
37.97
40.1

Associated Gene:

Gene:
SLC2A2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21263992 - 21270491
6500