Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_21265083_21265833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21265083 - 21265833

Intron Length:

751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCAGAG

U12 Branch Point Sequence:

GGGCGCAGAGCC

Flanking Amino Acid:

TVGWIGDRLGRVKAMLVVNV

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

39.2

-0.6

1.4

29.8

34.6

Major PPT

76.3

0.59

0.8

69.7

31.1

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

35.3

-1.1

39.8

38.4

Associated Gene:

Gene:

SLC2A2

Ensembl Gene ID:

ENSAPLG00000010156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010622

21263992 - 21270491

6500