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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2128766_2129331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2128766 - 2129331

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTGTTTTTACTT

Flanking Amino Acid:

DAERALKNLNGKMIMSFEMK

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

29.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

85.1

0.79

0.8

84.3

30.3

Minor 5ss

41.2

-1

56.7

Minor BPS

56.4

0.28

1.6

70.08

42.4

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236