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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2129498_2130738_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2129498 - 2130738

Intron Length:

1241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

CTACCTTCTACT

Flanking Amino Acid:

NLYLGNINPQMNEEMLCQEF

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

0.7

73.9

31.3

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

48.2

-0

1.9

66.54

43.8

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236