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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2130949_2131029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2130949 - 2131029

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTCTATTTATTT

Flanking Amino Acid:

QSDSDGQRRSMDAPSRRNRS

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

78.3

0.64

0.9

77.8

35.6

Minor 5ss

31.4

-2.1

2.7

33.6

35.4

Minor BPS

57.5

0.31

1.8

76.23

41.2

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034347

2102816 - 2147051

44236

ENSAPLT00000002428

2102816 - 2147051

44236