Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_21341172_21341356_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21341172 - 21341356

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTCCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

GGATCTGAGACA

Flanking Amino Acid:

LVACLTAYVSVSIILTLMVP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

75.7

40.1

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

80.1

0.68

0.7

72.7

32.1

Minor 5ss

40.2

-1.1

2.8

57.6

39.6

Minor BPS

42.6

-0.5

2.2

52.06

39.9

Associated Gene:

Gene:

SLC7A14

Ensembl Gene ID:

ENSAPLG00000009288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009665

21334264 - 21345107

10844