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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2136657_2139149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2136657 - 2139149

Intron Length:

2493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ACTCCTTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTTTCTTACTC

Flanking Amino Acid:

VHNTGSADTHPLMESKLKAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

73.6

Major BPS

73.5

0.59

81.3

29.9

Major PPT

79.2

0.66

0.8

72.5

31.6

Minor 5ss

36.9

-1.5

2.9

47.3

41.1

Minor BPS

72.3

0.68

1.5

81.43

33.4

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002428

2102816 - 2147051

44236

ENSAPLT00000034347

2102816 - 2147051

44236