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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2139198_2147006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2139198 - 2147006

Intron Length:

7809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTGCCTCACTT

Flanking Amino Acid:

PGGSQKGGGKVRLPDAVHNT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.8

0.74

0.8

74.2

35.9

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

51.3

0.12

1.9

72.73

44.5

Associated Gene:

Gene:

U2SURP

Ensembl Gene ID:

ENSAPLG00000002348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002428

2102816 - 2147051

44236

ENSAPLT00000034347

2102816 - 2147051

44236