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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21401373_21407624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21401373 - 21407624

Intron Length:

6252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

TTTCTCAGATTT

Flanking Amino Acid:

HQVRVKAYYKGDIMITYFEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

64.7

0.37

31.5

Major PPT

84.2

0.77

0.8

84.4

30.5

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

46.5

-0.1

1.9

71.08

39.8

Associated Gene:

Gene:

PRKCI

Ensembl Gene ID:

ENSAPLG00000008398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008816

21385697 - 21407734

22038