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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21416864_21419059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21416864 - 21419059

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TCTTGCTTAACA

Flanking Amino Acid:

QAQMYLRAQMLIFTPATTVA

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

77.8

0.62

0.9

73.2

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

75.3

0.79

1.7

83.03

38.2

Associated Gene:

Gene:

PHC3

Ensembl Gene ID:

ENSAPLG00000008376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046669

21412610 - 21433490

20881

ENSAPLT00000008697

21412610 - 21437321

24712