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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21422770_21424236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21422770 - 21424236

Intron Length:

1467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTGA

5'SS Class:

major

3'SS Sequence:

CCTCCCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CCTCCCTTCACA

Flanking Amino Acid:

TSSIHQLITPASYSPLQPHS

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

66.6

41.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

77.3

0.61

0.7

71.1

26.9

Minor 5ss

34.7

-1.7

3.5

46.6

48.7

Minor BPS

61.1

0.34

1.8

68.36

44.1

Associated Gene:

Gene:

PHC3

Ensembl Gene ID:

ENSAPLG00000008376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046669

21412610 - 21433490

20881

ENSAPLT00000008697

21412610 - 21437321

24712