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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21425115_21426075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21425115 - 21426075

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TAGACTTGAAAT

Flanking Amino Acid:

QPSVPIETPVIYQVENVCEE

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

71.6

0.54

33.1

Major PPT

72.7

0.51

67.2

42.9

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

52.9

0.17

1.6

68.42

41.8

Associated Gene:

Gene:

PHC3

Ensembl Gene ID:

ENSAPLG00000008376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046669

21412610 - 21433490

20881

ENSAPLT00000008697

21412610 - 21437321

24712