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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21426227_21427672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21426227 - 21427672

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TATAACATACCT

Flanking Amino Acid:

EALNSEEPLSDHVGIPSVTS

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

69.1

0.48

32.1

Major PPT

86.8

0.83

0.8

84.8

35.6

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

47.8

-0

2.1

72.45

43.5

Associated Gene:

Gene:

PHC3

Ensembl Gene ID:

ENSAPLG00000008376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046669

21412610 - 21433490

20881

ENSAPLT00000008697

21412610 - 21437321

24712