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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21427927_21428475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21427927 - 21428475

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTATTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTGCTTTTATT

Flanking Amino Acid:

VIQEGLEPFPVSRSSLLVEQ

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

74.8

35.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

70.3

0.46

66.7

39.3

Minor 5ss

39.2

-1.2

3.4

45.5

Minor BPS

64.7

0.55

1.7

83.31

38.3

Associated Gene:

Gene:

PHC3

Ensembl Gene ID:

ENSAPLG00000008376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046669

21412610 - 21433490

20881

ENSAPLT00000008697

21412610 - 21437321

24712