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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21428633_21431537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21428633 - 21431537

Intron Length:

2905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTAGT

5'SS Class:

major

3'SS Sequence:

TTCCTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATTGAAACT

Flanking Amino Acid:

DTEIEDMIAEEGLDEIENDL

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.6

Major BPS

100

1.24

0.5

100

Major PPT

82.5

0.73

0.6

81.5

23.6

Minor 5ss

39.9

-1.1

2.5

52.3

44.2

Minor BPS

45.1

-0.2

2.2

67.12

44.4

Associated Gene:

Gene:

PHC3

Ensembl Gene ID:

ENSAPLG00000008376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046669

21412610 - 21433490

20881

ENSAPLT00000008697

21412610 - 21437321

24712