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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21460385_21460983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21460385 - 21460983

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAAATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTTAAAT

Flanking Amino Acid:

FVASILLLAVARCILFLIIW

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.3

0.68

0.9

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

75.1

0.86

1.2

87.12

31.6

Associated Gene:

Gene:

SEC62

Ensembl Gene ID:

ENSAPLG00000008149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008468

21459915 - 21472698

12784