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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21462104_21464627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21462104 - 21464627

Intron Length:

2524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGCTTTTCAAGT

Flanking Amino Acid:

EDQVFLDGNEVYVWIYDPVH

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.8

0.65

0.9

73.9

36.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

49.7

0.06

1.8

67.87

43.5

Associated Gene:

Gene:

SEC62

Ensembl Gene ID:

ENSAPLG00000008149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008468

21459915 - 21472698

12784