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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21469362_21469744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21469362 - 21469744

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGGTTA

5'SS Class:

major

3'SS Sequence:

TTTTTCCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CCCCCCCCATTT

Flanking Amino Acid:

MMGHRVDYFIASKAVDCLLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

87.4

0.84

0.6

86.4

20.3

Minor 5ss

39.4

-1.2

3.6

55.1

49.1

Minor BPS

39.6

-0.7

1.9

49.84

44.1

Associated Gene:

Gene:

SEC62

Ensembl Gene ID:

ENSAPLG00000008149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008468

21459915 - 21472698

12784