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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21469832_21472646_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21469832 - 21472646

Intron Length:

2815

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCTGGTGAT

5'SS Class:

major

3'SS Sequence:

GAGCCGTTCAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

AGCCGTTCAAAG

Flanking Amino Acid:

PESLQGREKIEEKAVAKYLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.2

73.8

40.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

49.9

-0

1.1

47.4

39.3

Minor 5ss

-3.6

3.8

31.3

Minor BPS

39.4

-0.9

1.9

37.45

38.5

Associated Gene:

Gene:

SEC62

Ensembl Gene ID:

ENSAPLG00000008149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008468

21459915 - 21472698

12784