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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21533633_21533830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21533633 - 21533830

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CATTCTTCATCT

Flanking Amino Acid:

FVLHSSIFVTGLDLRYNVLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

86.1

0.81

0.8

84.3

30.3

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

54.8

0.23

1.8

73.17

43.8

Associated Gene:

Gene:

LRRC34

Ensembl Gene ID:

ENSAPLG00000007678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007986

21532508 - 21542189

9682