Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_21533896_21534658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21533896 - 21534658

Intron Length:

763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCAAAA

5'SS Class:

major

3'SS Sequence:

ATTTGTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTCTGCTGTATT

Flanking Amino Acid:

GAKHMATLLQENSTLRYLNL

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

64.1

37.7

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

68.6

0.42

1.1

72.4

37.5

Minor 5ss

31.8

-2.1

3.1

39.8

45.8

Minor BPS

48.1

-0

2.2

72.38

44.7

Associated Gene:

Gene:

LRRC34

Ensembl Gene ID:

ENSAPLG00000007678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007986

21532508 - 21542189

9682