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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21860170_21861626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21860170 - 21861626

Intron Length:

1457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTAGTCAC

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

GTCTCACCAACC

Flanking Amino Acid:

SHETMAPDIHEERQYRCEDC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

64.8

41.3

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

31.4

-2.1

2.7

38.4

39.3

Minor BPS

46.6

-0.2

2.1

61.86

42.8

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039767

21860121 - 21895201

35081

ENSAPLT00000012681

21860121 - 21894260

34140