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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21861844_21864431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21861844 - 21864431

Intron Length:

2588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

CTGCTGGTAACC

Flanking Amino Acid:

ECDQVFPDLQSLEKHMLSHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

77.5

0.62

0.8

72.3

32.4

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

-0.6

2.5

54.46

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012681

21860121 - 21894260

34140

ENSAPLT00000039767

21860121 - 21895201

35081