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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21865589_21871425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21865589 - 21871425

Intron Length:

5837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTACATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TGTTGTTTACAT

Flanking Amino Acid:

HIHSSVKPFICEVCHKSYTQ

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.8

0.6

70.5

39.5

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

49.5

0.04

2.1

73.53

43.4

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012681

21860121 - 21894260

34140

ENSAPLT00000039767

21860121 - 21895201

35081