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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21872783_21874726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21872783 - 21874726

Intron Length:

1944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

TTAACATTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTAATTTTAACA

Flanking Amino Acid:

PTPFFMDPIYRVEKRKLTDP

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

76.7

0.6

0.9

69.5

40.4

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

64.8

0.46

1.3

68.15

38.4

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039767

21860121 - 21895201

35081

ENSAPLT00000012681

21860121 - 21894260

34140