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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21889125_21890162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21889125 - 21890162

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTACG

5'SS Class:

major

3'SS Sequence:

TTCTCCTATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTCTCCTATTA

Flanking Amino Acid:

LKKHENGNMSGTATSSPHSE

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.8

40.4

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

71.2

0.48

31.9

Minor 5ss

42.3

-0.9

2.4

48.9

41.3

Minor BPS

-0

1.9

69.11

37.3

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039767

21860121 - 21895201

35081

ENSAPLT00000012681

21860121 - 21894260

34140