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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21890308_21892977_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21890308 - 21892977

Intron Length:

2670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTACTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

NNQSPRNSEERMNGSHFKDE

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.7

1.12

0.6

91.3

19.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.1

0.63

0.9

74.4

40.4

Minor 5ss

44.8

-0.6

2.8

61.1

43.8

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039767

21860121 - 21895201

35081

ENSAPLT00000012681

21860121 - 21894260

34140