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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21894198_21895066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21894198 - 21895066

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAC

U12 Branch Point Sequence:

GAAGCATGACCT

Flanking Amino Acid:

QPLYRKSKSQAYAMMLSLSD

Intron Amino Acid Position:

989

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

75.7

32.1

Major BPS

53.9

0.1

1.2

55.8

37.4

Major PPT

80.5

0.69

0.9

73.1

37.2

Minor 5ss

34.3

-1.8

3.6

49.9

46.6

Minor BPS

42.9

-0.4

57.35

44.3

Associated Gene:

Gene:

MECOM

Ensembl Gene ID:

ENSAPLG00000012134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039767

21860121 - 21895201

35081