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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21956039_21957092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21956039 - 21957092

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

CTTCTCCTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCACAA

U12 Branch Point Sequence:

GCAGCACAAGCT

Flanking Amino Acid:

AGWMGERCDAVCPPGFFGER

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

47.8

-0.1

52.7

34.2

Major PPT

81.8

0.72

0.7

76.7

25.3

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

34.8

-1

2.1

47.42

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013060

21944074 - 22126429

182356