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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2200399_2201985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2200399 - 2201985

Intron Length:

1587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACTGTACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGGCCTCTACT

Flanking Amino Acid:

KFSAAEPHERGDQYCGGRLE

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

79.6

34.4

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

73.5

0.53

62.9

42.7

Minor 5ss

42.8

-0.8

3.2

61.1

43.8

Minor BPS

54.3

0.22

76.35

Associated Gene:

Gene:

PCOLCE2

Ensembl Gene ID:

ENSAPLG00000002646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002673

2191709 - 2217052

25344