Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_22131410_22149530_R

Intron Information:

Intron Rank:

142182

Intron Class:

major

Intron Phase:

Intron Coordinates:

22131410 - 22149530

Intron Length:

18121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGACTT

5'SS Class:

major

3'SS Sequence:

TCTTCCCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

AAATTGTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

64.5

41.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

81.6

0.71

0.7

73.9

31.2

Minor 5ss

34.4

-1.8

3.4

49.3

46.4

Minor BPS

46.9

-0.1

2.4

67.86

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044216

22131272 - 22150069

18798