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Intron Name: Anas_platyrhynchos_platyrhynchos_9_22178268_22179048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22178268 - 22179048

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCAGC

5'SS Class:

major

3'SS Sequence:

TAATGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AAATCCTTAATG

Flanking Amino Acid:

HEAVAEEPKEDEKPKEREEI

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.3

44.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

80.4

0.68

0.9

77.3

41.3

Minor 5ss

38.7

-1.3

3.1

52.2

44.6

Minor BPS

73.7

0.6

1.3

68.29

Associated Gene:

Gene:

GOLIM4

Ensembl Gene ID:

ENSAPLG00000013038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047878

22155956 - 22186808

30853

ENSAPLT00000013602

22155956 - 22186808

30853