Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_22180853_22181430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22180853 - 22181430

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAAAATC

5'SS Class:

major

3'SS Sequence:

ATACTCTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTGCATATACT

Flanking Amino Acid:

QGEKLYKNRLSQQARYDNMD

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

73.4

35.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

76.3

0.59

0.9

73.6

Minor 5ss

33.7

-1.9

43.3

Minor BPS

48.2

-0

2.3

77.25

44.9

Associated Gene:

Gene:

GOLIM4

Ensembl Gene ID:

ENSAPLG00000013038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047878

22155956 - 22186808

30853

ENSAPLT00000013602

22155956 - 22186808

30853