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Intron Name: Anas_platyrhynchos_platyrhynchos_9_22184311_22186226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22184311 - 22186226

Intron Length:

1916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATGTACAGAACA

Flanking Amino Acid:

EQYQEEGEEEIQEDLTEEKK

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

79.2

0.66

0.9

72.8

37.5

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

-0

1.9

65.26

40.3

Associated Gene:

Gene:

GOLIM4

Ensembl Gene ID:

ENSAPLG00000013038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047878

22155956 - 22186808

30853

ENSAPLT00000013602

22155956 - 22186808

30853