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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2221629_2222443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2221629 - 2222443

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TTTTGCTTAAGT

Flanking Amino Acid:

GKVKRQNSLKEWRNLKQKRD

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

74.6

0.55

1.1

74.8

38.8

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

70.8

0.73

91.67

38.1

Associated Gene:

Gene:

TRPC1

Ensembl Gene ID:

ENSAPLG00000002664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002748

2221401 - 2241659

20259