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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2229527_2232133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2229527 - 2232133

Intron Length:

2607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTATG

5'SS Class:

major

3'SS Sequence:

CTTCCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTTTTTTTACCT

Flanking Amino Acid:

IDYLLIIWLIGMVWSDVKRL

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

74.5

41.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.1

0.68

0.7

73.6

24.6

Minor 5ss

38.1

-1.3

3.1

47.3

42.8

Minor BPS

68.3

0.65

1.6

83.79

37.4

Associated Gene:

Gene:

TRPC1

Ensembl Gene ID:

ENSAPLG00000002664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002748

2221401 - 2241659

20259