Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_22300885_22300966_F

Intron Information:

Intron Rank:

143399

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22300885 - 22300966

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

AACACTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

0.5

0.9

61.4

35.9

Major PPT

55.9

0.13

1.1

56.5

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

53.7

0.2

1.4

65.16

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023699

22300813 - 22314373

13561