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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2232471_2232845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2232471 - 2232845

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GATTTCTCATTG

Flanking Amino Acid:

KLAIKYNQKEFVAQSNCQQF

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

42.6

-0.8

2.8

59.4

45.1

Minor BPS

47.7

-0.3

1.8

53.24

41.8

Associated Gene:

Gene:

TRPC1

Ensembl Gene ID:

ENSAPLG00000002664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002748

2221401 - 2241659

20259