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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2233042_2233789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2233042 - 2233789

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TAGTTTCTACTG

Flanking Amino Acid:

KELSLVEVEFRNDYEELAQQ

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

80.2

0.68

0.9

76.9

37.3

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

44.1

-0.5

1.9

47.97

40.3

Associated Gene:

Gene:

TRPC1

Ensembl Gene ID:

ENSAPLG00000002664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002748

2221401 - 2241659

20259